- Class: 3
- Architecture: 3.40:3-Layer(aba) Sandwich
- Topology: 3.40.50:Rossmann fold
- Homology: 3.40.50.1110:SGNH hydrolase
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1bwp | [A2] | [A2] | [A2] | 2.1 | ||||
1bwq | [A2] | [A2] | [A2] | 2.3 | ||||
1bwr | [A2] | [A2] | [A2] | 2.4 | ||||
1deo | [A] | [A] | [A] | 1.55 | BMA:BETA-D-MANNOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
1dex | [A] | [A] | [A] | 1.9 | BMA:BETA-D-MANNOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
1es9 | [A2] | [A2] | [A2] | 1.3 | ||||
1esc | [A] | [A] | [A] | 2.1 | ||||
1esd | [A] | [A] | [A] | 2.3 | VXA:METHYLPHOSPHONIC ACID ESTER GROUP | |||
1ese | [A] | [A] | [A] | 2.4 | DEP:DIETHYL PHOSPHONATE | |||
1fxw | [AB] | [A2] | [A2] | 2.1 | CA:CALCIUM ION | |||
1ivn | [A] | [A] | [A] | 1.9 | GOL:GLYCEROL SO4:SULFATE ION | |||
1j00 | [A] | [A] | [A] | 2 | SDP:2-AMINO-3-(DIETHOXY-PHOSPHORYLOXY)-PROPIONIC ACID SO4:SULFATE ION | |||
1jrl | [A] | [A] | [A] | 1.95 | IMD:IMIDAZOLE SO4:SULFATE ION | |||
1k7c | [A] | [A] | [A] | 1.12 | MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
1pp4 | [A] | [A] | [A] | 2.5 | NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
1u8u | [A] | [A] | [A] | 2.08 | GOL:GLYCEROL OCA:OCTANOIC ACID (CAPRYLIC ACID) SO4:SULFATE ION | |||
1v2g | [A] | [A] | [A] | 2 | IMD:IMIDAZOLE OCA:OCTANOIC ACID (CAPRYLIC ACID) SO4:SULFATE ION | |||
1vjg | [A2] | [A2] | [A2] | 2.01 | MSE:SELENOMETHIONINE | |||
1vyh | [A2B2] | [A2B2] | [A2B2] | 3.4 | ||||
1wab | [A2] | [A2] | [A2] | 1.7 | ACT:ACETATE ION | |||
1yzf | [A] | [A] | [A] | 1.9 | ||||
1z8h | [A2] | [A2] | [A2] | 2.02 | IPA:ISOPROPYL ALCOHOL MSE:SELENOMETHIONINE UNL:UNKNOWN LIGAND | |||
1zmb | [A2] | [A2] | [A2] | 2.61 | MSE:SELENOMETHIONINE | |||
2apj | [A] | [A] | [A] | 1.6 | SEB:O-BENZYLSULFONYL-SERINE | |||
2hsj | [A4] | [A4] | [A4] | 1.5 | GOL:GLYCEROL MG:MAGNESIUM ION MSE:SELENOMETHIONINE | |||
2o14 | [A] | [A] | [A] | 2.1 | MN:MANGANESE (II) ION MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
2q0q | [A8] | [A8] | [A8] | 1.5 | GOL:GLYCEROL MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
2q0s | [A8] | [A8] | [A8] | 1.5 | N10:O-[(HEXYLAMINO)CARBONYL]-L-SERINE SO4:SULFATE ION | |||
2vpt | [A2] | [A2] | [A2] | 1.4 | CA:CALCIUM ION MSE:SELENOMETHIONINE | |||
2w9x | [A2] | [A2] | [A2] | 2 | GOL:GLYCEROL | |||
2waa | [A] | [A] | [A] | 1.8 | ACT:ACETATE ION GOL:GLYCEROL | |||
2wab | [A] | [A] | [A] | 1.9 | BGC:BETA-D-GLUCOPYRANOSE GOL:GLYCEROL IOD:IODIDE ION | |||
2wao | [A] | [A] | [A] | 1.8 | BGC:BETA-D-GLUCOPYRANOSE FMT:FORMIC ACID | |||
3bzw | [A6] | [A6] | [A6] | 1.87 | ACT:ACETATE ION MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
3c1u | [A] | [A] | [A] | 1.33 | ACT:ACETATE ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
3dc7 | [A3] | [A3] | [A3] | 2.12 | MG:MAGNESIUM ION MSE:SELENOMETHIONINE NA:SODIUM ION SO4:SULFATE ION | |||
3dci | [A6] | [A6] | [A6] | 2 | ACY:ACETIC ACID CL:CHLORIDE ION MSE:SELENOMETHIONINE ZN:ZINC ION | |||
3dt6 | [A] | [A] | [A] | 2.1 | DEP:DIETHYL PHOSPHONATE | |||
3dt8 | [A] | [A] | [A] | 1.85 | SGB:O-[(S)-METHYL(1-METHYLETHOXY)PHOSPHORYL]-L-SERINE | |||
3dt9 | [A] | [A] | [A] | 1.85 | GD7:(1R)-1,2,2-TRIMETHYLPROPYL (R)-METHYLPHOSPHINATE | |||
3hp4 | [A] | [A] | [A] | 1.35 | MIR:MONOETHYLPHOSPHORYLSERINE | |||
3kvn | [A] | [A] | [A] | 2.5 | C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | |||
3mil | [A2] | [A2] | [A2] | 1.6 | GOL:GLYCEROL | |||
3p94 | [A] | [A] | [A] | 1.93 | MSE:SELENOMETHIONINE PG4:TETRAETHYLENE GLYCOL | |||
3rjt | [A2] | [A2] | [A2] | 1.5 | ACT:ACETATE ION CL:CHLORIDE ION CSO:S-HYDROXYCYSTEINE EDO:1,2-ETHANEDIOL MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
3skv | [A] | [A] | [A] | 2.49 | GOL:GLYCEROL | |||
3slr | [A] | [A] | [A] | 1.71 | MG:MAGNESIUM ION MSE:SELENOMETHIONINE | |||
3u37 | [A4] | [A4] | [A4] | 2.1 | ACY:ACETIC ACID GOL:GLYCEROL | |||
3w7v | [A8] | [A8] | [A8] | 1.85 | CL:CHLORIDE ION GOL:GLYCEROL | |||
4dev | [A4] | [A4] | [A4] | 2 | ACY:ACETIC ACID CL:CHLORIDE ION GOL:GLYCEROL PEG:DI(HYDROXYETHYL)ETHER | |||
4h08 | [A2] | [A2] | [A2] | 1.8 | GOL:GLYCEROL IPA:ISOPROPYL ALCOHOL MSE:SELENOMETHIONINE UNL:UNKNOWN LIGAND | |||
4hf7 | [A2] | [A2] | [A2] | 1.77 | MSE:SELENOMETHIONINE OSE:O-SULFO-L-SERINE | |||
4hyq | [A] | [A] | [A] | 1.75 | 1PE:PENTAETHYLENE GLYCOL | |||
4i8i | [A] | [A] | [A] | 1.5 | ACT:ACETATE ION MSE:SELENOMETHIONINE | |||
4iyj | [A2] | [A2] | [A2] | 1.37 | CL:CHLORIDE ION GOL:GLYCEROL MSE:SELENOMETHIONINE UNL:UNKNOWN LIGAND | |||
4jgg | [A] | [A] | [A] | 1.9 | ||||
4jhl | [A8] | [A8] | [A8] | 1.7 | CL:CHLORIDE ION GOL:GLYCEROL MSE:SELENOMETHIONINE | |||
4jj4 | [A8] | [A8] | [A8] | 2.13 | CL:CHLORIDE ION GOL:GLYCEROL | |||
4jj6 | [A8] | [A8] | [A8] | 1.8 | CL:CHLORIDE ION GOL:GLYCEROL | |||
4jko | [A8] | [A8] | [A8] | 1.9 | GOL:GLYCEROL PO4:PHOSPHATE ION | |||
4k3u | [A] | [A] | [A] | 2.16 | EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | |||
4k40 | [A] | [A] | [A] | 2.63 | ||||
4k7j | [A] | [A] | [A] | 1.97 | ACT:ACETATE ION EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | |||
4k9s | [A] | [A] | [A] | 2.33 | MSE:SELENOMETHIONINE | |||
4lhs | [A2] | [A2] | [A2] | 1.4 | GOL:GLYCEROL MSE:SELENOMETHIONINE PEG:DI(HYDROXYETHYL)ETHER | |||
4m8k | [A] | [A] | [A] | 1.9 | ACT:ACETATE ION CL:CHLORIDE ION MSE:SELENOMETHIONINE | |||
4nrd | [A3] | [A3] | [A3] | 2.1 | EDO:1,2-ETHANEDIOL MSE:SELENOMETHIONINE | |||
4oao | [A8] | [A8] | [A8] | 2.05 | CL:CHLORIDE ION GOL:GLYCEROL | |||
4oap | [A8] | [A8] | [A8] | 1.93 | ACT:ACETATE ION CL:CHLORIDE ION GOL:GLYCEROL | |||
4ppy | [A2] | [A2] | [A2] | 2 | MSE:SELENOMETHIONINE | |||
4q7q | [A] | [A] | [A] | 1.45 | CL:CHLORIDE ION FMT:FORMIC ACID MSE:SELENOMETHIONINE PG4:TETRAETHYLENE GLYCOL | |||
4q9a | [A2] | [A2] | [A2] | 2.86 | MSE:SELENOMETHIONINE SEP:PHOSPHOSERINE | |||
4rsh | [A] | [A] | [A] | 2.19 | CL:CHLORIDE ION MSE:SELENOMETHIONINE | |||
4rw0 | [A] | [A] | [A] | 2 | GOL:GLYCEROL MSE:SELENOMETHIONINE NA:SODIUM ION | |||
4s1p | [A] | [A] | [A] | 1.45 | MSE:SELENOMETHIONINE UNL:UNKNOWN LIGAND | |||
4tx1 | [A6] | [A6] | [A6] | 1.75 | ||||
4xvh | [A] | [A] | [A] | 1.94 | GOL:GLYCEROL PEU:2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL | |||
5a4a | [A] | [A] | [A] | 1.7 | SO4:SULFATE ION | |||
5b5l | [A] | [A] | [A] | 1.4 | ACT:ACETATE ION CA:CALCIUM ION PEG:DI(HYDROXYETHYL)ETHER ZN:ZINC ION | |||
5b5s | [A] | [A] | [A] | 1.5 | BOG:OCTYL BETA-D-GLUCOPYRANOSIDE CA:CALCIUM ION GOL:GLYCEROL SO3:SULFITE ION | |||
5bn1 | [A8] | [A8] | [A8] | 1.6 | CL:CHLORIDE ION GOL:GLYCEROL IMD:IMIDAZOLE TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
5cd9 | [A] | [A] | [A] | 2.1 | MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
5hoe | [A8] | [A8] | [A8] | 1.45 | P6G:HEXAETHYLENE GLYCOL PO4:PHOSPHATE ION | |||
5jd3 | [A] | [A] | [A] | 2.3 | CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER SO4:SULFATE ION | |||
5mal | [A] | [A] | [A] | 1.71 | ||||
5tic | [A] | [A] | [A] | 1.65 | CL:CHLORIDE ION | |||
5tid | [A] | [A] | [A] | 1.2 | OCA:OCTANOIC ACID (CAPRYLIC ACID) | |||
5tie | [A] | [A] | [A] | 1.15 | OCA:OCTANOIC ACID (CAPRYLIC ACID) | |||
5tif | [A] | [A] | [A] | 0.97 | OCA:OCTANOIC ACID (CAPRYLIC ACID) PEG:DI(HYDROXYETHYL)ETHER |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA